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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12982 and 12983 are separated by 2681 nucleotides
12983 and 12984 are separated by 923 nucleotides
12984 and 12985 are separated by 669 nucleotides
12985 and 12986 are separated by 7804 nucleotides
mRNA_4614: 12982 - BLAST B-cell lymphoma/leukemia 11B [Orchesella cincta], at 599,897 to 601,386
12982
mRNA_4615: 12983 - Hypothetical Protein, at 604,068 to 604,303
12983
mRNA_4616: 12984 - Hypothetical Protein, at 605,227 to 605,994
12984
mRNA_4617: 12985 - Hypothetical Protein, at 606,664 to 607,161
12985
mRNA_4618: 12986 - Hypothetical Protein, at 614,966 to 615,210
12986
Group
Condition
mRNA
_4614
mRNA
_4615
mRNA
_4616
mRNA
_4617
mRNA
_4618
12982
12983
12984
12985
12986
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
N.D.
N.D.
-0.2
-3.8
ypd buoyancy
40 hrs High Buoyancy
-0.7
N.D.
N.D.
-0.3
-0.2
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
N.D.
-0.1
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
N.D.
N.D.
-0.4
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
N.D.
N.D.
-0.3
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
N.D.
N.D.
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
N.D.
N.D.
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.7
N.D.
N.D.
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
N.D.
N.D.
-0.2
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.8
N.D.
N.D.
-0.0
+0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
N.D.
-0.0
+0.1
growth on oleic acid
YNB Oleic Acid
-0.0
N.D.
N.D.
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
N.D.
-0.1
+0.3
growth on oleic acid
YNB Glucose
+0.4
N.D.
N.D.
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
N.D.
-0.1
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
N.D.
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
N.D.
+0.3
+0.3
auxotrophy
YNB Glucose
-0.1
N.D.
N.D.
+0.1
+0.5
auxotrophy
Dropout Complete
+0.1
N.D.
N.D.
+0.0
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
N.D.
-0.2
+1.1
growth on ypd
YPD
+0.3
N.D.
N.D.
-0.8
+2.1
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