Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12988 and 12989 are separated by 124 nucleotides12989 and 12990 are separated by 324 nucleotides12990 and 12991 are separated by 373 nucleotides12991 and 12992 are separated by 297 nucleotides mRNA_4620: 12988 - K05293 PIGU phosphatidylinositol glycan, class U, at 617,665 to 619,015 12988 mRNA_4621: 12989 - KOG0141 Isovaleryl-CoA dehydrogenase, at 619,140 to 621,311 12989 mRNA_4622: 12990 - K20168 TBC1D15 TBC1 domain family member 15, at 621,636 to 624,863 12990 mRNA_4623: 12991 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 625,237 to 628,203 12991 mRNA_4624: 12992 - Hypothetical Protein, at 628,501 to 629,051 12992
Group Condition mRNA_4620 mRNA_4621 mRNA_4622 mRNA_4623 mRNA_4624
12988 12989 12990 12991 12992
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 -0.8 +0.3 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.0 +0.0 +0.3 -0.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.4 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.7 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.4 +0.1 +0.0
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.1 -0.1 +0.2
auxotrophy Dropout Complete N.D. -0.4 +0.4 -0.6 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 -0.2 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.5 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.1 -0.1 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.5 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 +0.3 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 +0.3 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 +0.3 +0.2 -0.1
growth on ypd YPD N.D. +0.9 -0.7 -0.2 +0.4
growth on oleic acid YNB Glucose N.D. -0.2 +0.3 +0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 +0.5 -0.1 +0.6
auxotrophy YNB Glucose N.D. -0.2 +0.4 +0.0 +0.7
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.6 -0.0 +0.4
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