Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12989 and 12990 are separated by 324 nucleotides12990 and 12991 are separated by 373 nucleotides12991 and 12992 are separated by 297 nucleotides12992 and 12993 are separated by 300 nucleotides mRNA_4621: 12989 - KOG0141 Isovaleryl-CoA dehydrogenase, at 619,140 to 621,311 12989 mRNA_4622: 12990 - K20168 TBC1D15 TBC1 domain family member 15, at 621,636 to 624,863 12990 mRNA_4623: 12991 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 625,237 to 628,203 12991 mRNA_4624: 12992 - Hypothetical Protein, at 628,501 to 629,051 12992 mRNA_4625: 12993 - K09660 MPDU1 mannose-P-dolichol utilization defect 1, at 629,352 to 630,709 12993
Group Condition mRNA_4621 mRNA_4622 mRNA_4623 mRNA_4624 mRNA_4625
12989 12990 12991 12992 12993
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.8 +0.3 -0.5 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.0 +0.3 -0.7 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.4 +0.1 -0.4 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.2 -0.2 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.3 -0.1 +0.1 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.7 -0.1 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.1 -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.3 -0.1 -0.2 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.5 -0.1 -0.2 -0.5
growth on oleic acid YNB Oleic Acid -0.2 +0.5 -0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 -0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.4 +0.1 +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.1 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.3 +0.2 -0.1 -0.3
auxotrophy Dropout Complete -0.4 +0.4 -0.6 +0.7 +0.3
growth on oleic acid YNB Glucose -0.2 +0.3 +0.3 -0.1 +0.1
growth on ypd YPD +0.9 -0.7 -0.2 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.2 +0.1 -0.3 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.5 -0.1 +0.6 +0.2
auxotrophy YNB Glucose -0.2 +0.4 +0.0 +0.7 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.6 -0.0 +0.4 +0.1
remove
mRNA_4621
plot
remove
mRNA_4622
plot
remove
mRNA_4623
remove
mRNA_4624
plot
remove
mRNA_4625
plot