Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12992 and 12993 are separated by 300 nucleotides12993 and 12994 are separated by 246 nucleotides12994 and 12995 are separated by 281 nucleotides12995 and 12996 are separated by 490 nucleotides mRNA_4624: 12992 - Hypothetical Protein, at 628,501 to 629,051 12992 mRNA_4625: 12993 - K09660 MPDU1 mannose-P-dolichol utilization defect 1, at 629,352 to 630,709 12993 mRNA_4626: 12994 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 630,956 to 632,424 12994 mRNA_4627: 12995 - K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4, at 632,706 to 638,769 12995 mRNA_4628: 12996 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 639,260 to 641,629 12996
Group Condition mRNA_4624 mRNA_4625 mRNA_4626 mRNA_4627 mRNA_4628
12992 12993 12994 12995 12996
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -1.1 +0.1 -1.5 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.6 +0.2 -0.0 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.8 +0.1 -1.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 +0.1 -1.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.5 +0.1 -0.6 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.5 -0.2 -0.3 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.4 +0.0 -0.3 -0.2
growth on oleic acid YNB Glucose -0.1 +0.1 +0.3 -0.3 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.7 +0.1 +0.0 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.4 +0.1 -0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.1 -0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.1 +0.2 -0.6 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.1 -0.0 -0.7 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.4 +0.1 -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.5 +0.3 -0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 +0.5 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 +0.2 +0.7 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.2 -0.1 -0.2 +0.3
auxotrophy YNB Glucose +0.7 +0.2 +0.1 -0.3 +0.1
auxotrophy Dropout Complete +0.7 +0.3 -0.0 -0.1 +0.5
growth on ypd YPD +0.4 +0.2 -0.5 +0.2 +1.3
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