Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12993 and 12994 are separated by 246 nucleotides12994 and 12995 are separated by 281 nucleotides12995 and 12996 are separated by 490 nucleotides12996 and 12997 are separated by 947 nucleotides mRNA_4625: 12993 - K09660 MPDU1 mannose-P-dolichol utilization defect 1, at 629,352 to 630,709 12993 mRNA_4626: 12994 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 630,956 to 632,424 12994 mRNA_4627: 12995 - K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4, at 632,706 to 638,769 12995 mRNA_4628: 12996 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 639,260 to 641,629 12996 mRNA_4629: 12997 - K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14, at 642,577 to 644,729 12997
Group Condition mRNA_4625 mRNA_4626 mRNA_4627 mRNA_4628 mRNA_4629
12993 12994 12995 12996 12997
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.2 -0.0 -0.8 -2.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 -0.7 +0.1 -1.6
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 +0.1 -1.5 +0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.2 -0.3 -0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 -0.6 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 -1.4 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +0.1 -1.3 +0.5 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.1 -0.1 +0.0 -0.7
growth on oleic acid YNB Oleic Acid -0.4 +0.0 -0.3 -0.2 -0.0
growth on oleic acid YNB Glucose +0.1 +0.3 -0.3 -0.7 +0.0
auxotrophy YNB Glucose +0.2 +0.1 -0.3 +0.1 -0.8
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 -0.2 +0.3 -0.7
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.4 +0.1 +0.2
auxotrophy Dropout Complete +0.3 -0.0 -0.1 +0.5 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.1 +0.0 +0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.6 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.3 -0.0 +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.5 -0.0 +0.4 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.1 -0.2 -0.0 +0.0
growth on ypd YPD +0.2 -0.5 +0.2 +1.3 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.2 +0.7 -0.1 +0.1
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