Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12993 and 12994 are separated by 246 nucleotides
12994 and 12995 are separated by 281 nucleotides
12995 and 12996 are separated by 490 nucleotides
12996 and 12997 are separated by 947 nucleotides
mRNA_4625: 12993 - K09660 MPDU1 mannose-P-dolichol utilization defect 1, at 629,352 to 630,709
12993
mRNA_4626: 12994 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 630,956 to 632,424
12994
mRNA_4627: 12995 - K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4, at 632,706 to 638,769
12995
mRNA_4628: 12996 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 639,260 to 641,629
12996
mRNA_4629: 12997 - K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14, at 642,577 to 644,729
12997
Group
Condition
mRNA
_4625
mRNA
_4626
mRNA
_4627
mRNA
_4628
mRNA
_4629
12993
12994
12995
12996
12997
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.2
-0.0
-0.8
-2.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.0
-0.7
+0.1
-1.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.1
+0.1
-1.5
+0.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.2
-0.3
-0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.1
-0.6
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
-1.4
-0.2
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+0.1
-1.3
+0.5
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.1
-0.1
+0.0
-0.7
growth on oleic acid
YNB Oleic Acid
-0.4
+0.0
-0.3
-0.2
-0.0
growth on oleic acid
YNB Glucose
+0.1
+0.3
-0.3
-0.7
+0.0
auxotrophy
YNB Glucose
+0.2
+0.1
-0.3
+0.1
-0.8
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.1
-0.2
+0.3
-0.7
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.4
+0.1
+0.2
auxotrophy
Dropout Complete
+0.3
-0.0
-0.1
+0.5
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
+0.1
+0.0
+0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
-0.6
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.5
+0.3
-0.0
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.5
-0.0
+0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.1
-0.2
-0.0
+0.0
growth on ypd
YPD
+0.2
-0.5
+0.2
+1.3
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.2
+0.7
-0.1
+0.1
remove
mRNA_4625
plot
remove
mRNA_4626
plot
remove
mRNA_4627
remove
mRNA_4628
plot
remove
mRNA_4629
plot