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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12995 and 12996 are separated by 490 nucleotides
12996 and 12997 are separated by 947 nucleotides
12997 and 12998 are separated by 1277 nucleotides
12998 and 12999 are separated by 784 nucleotides
mRNA_4627: 12995 - K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4, at 632,706 to 638,769
12995
mRNA_4628: 12996 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 639,260 to 641,629
12996
mRNA_4629: 12997 - K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14, at 642,577 to 644,729
12997
mRNA_4630: 12998 - Hypothetical Protein, at 646,007 to 648,438
12998
mRNA_4631: 12999 - SUPERFAMILY--SSF103506, at 649,223 to 651,329
12999
Group
Condition
mRNA
_4627
mRNA
_4628
mRNA
_4629
mRNA
_4630
mRNA
_4631
12995
12996
12997
12998
12999
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.8
-2.1
-0.6
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.7
+0.1
-1.6
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.1
-0.5
-0.0
-0.7
growth on oleic acid
YNB Glucose
-0.3
-0.7
+0.0
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.1
-0.4
+0.0
-0.2
auxotrophy
YNB Glucose
-0.3
+0.1
-0.8
-0.2
+0.2
auxotrophy
Dropout Complete
-0.1
+0.5
-1.1
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.3
-0.7
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.4
-0.2
+0.3
+0.4
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
-0.7
+0.1
+0.2
growth on oleic acid
YNB Oleic Acid
-0.3
-0.2
-0.0
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.1
+0.1
+0.4
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.5
-0.3
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.5
+0.4
+0.2
+0.4
+0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.4
-0.4
-0.0
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.3
+0.5
+0.3
+0.3
+0.5
growth on ricinoleic acid
YNB Glucose
-0.4
+0.1
+0.2
+0.2
+0.4
growth on ypd
YPD
+0.2
+1.3
-0.7
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.4
-0.2
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.0
+0.0
+0.5
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
-0.1
+0.1
+0.5
+0.0
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