Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12996 and 12997 are separated by 947 nucleotides
12997 and 12998 are separated by 1277 nucleotides
12998 and 12999 are separated by 784 nucleotides
12999 and 13000 are separated by 342 nucleotides
mRNA_4628: 12996 - KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily), at 639,260 to 641,629
12996
mRNA_4629: 12997 - K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14, at 642,577 to 644,729
12997
mRNA_4630: 12998 - Hypothetical Protein, at 646,007 to 648,438
12998
mRNA_4631: 12999 - SUPERFAMILY--SSF103506, at 649,223 to 651,329
12999
mRNA_4632: 13000 - K13107 RBMX2, IST3 RNA-binding motif protein, X-linked 2, at 651,672 to 652,888
13000
Group
Condition
mRNA
_4628
mRNA
_4629
mRNA
_4630
mRNA
_4631
mRNA
_4632
12996
12997
12998
12999
13000
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-2.1
-0.6
-0.5
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.5
-0.0
-0.7
-0.1
growth on oleic acid
YNB Glucose
-0.7
+0.0
+0.0
-0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-1.6
+0.1
+0.1
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.3
-0.1
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
+0.1
+0.2
-0.5
auxotrophy
Dropout Complete
+0.5
-1.1
-0.2
+0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.7
+0.1
+0.2
+0.3
auxotrophy
YNB Glucose
+0.1
-0.8
-0.2
+0.2
+0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.4
+0.0
-0.2
+0.9
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.2
+0.1
+0.3
-0.4
growth on ypd
YPD
+1.3
-0.7
-0.2
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
+0.4
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.4
-0.0
+0.0
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.7
-0.1
+0.0
+1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.1
+0.5
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.3
+0.4
+0.3
+0.4
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
+0.2
+0.4
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.2
+0.4
+0.5
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.0
+0.5
+0.5
+0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.3
+0.3
+0.5
+0.9
remove
mRNA_4628
plot
remove
mRNA_4629
plot
remove
mRNA_4630
remove
mRNA_4631
plot
remove
mRNA_4632
plot