Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12999 and 13000 are separated by 342 nucleotides13000 and 13001 are separated by 99 nucleotides13001 and 13002 are separated by 1643 nucleotides13002 and 13003 are separated by 237 nucleotides mRNA_4631: 12999 - SUPERFAMILY--SSF103506, at 649,223 to 651,329 12999 mRNA_4632: 13000 - K13107 RBMX2, IST3 RNA-binding motif protein, X-linked 2, at 651,672 to 652,888 13000 mRNA_4633: 13001 - K00521 E1.16.1.7 ferric-chelate reductase, at 652,988 to 655,146 13001 mRNA_4634: 13002 - K00873 PK, pyk pyruvate kinase, at 656,790 to 659,276 13002 mRNA_4635: 13003 - Hypothetical Protein, at 659,514 to 660,743 13003
Group Condition mRNA_4631 mRNA_4632 mRNA_4633 mRNA_4634 mRNA_4635
12999 13000 13001 13002 13003
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.6 -0.4 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1 +0.1 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 -0.4 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.2 -0.5 -0.5 N.D. +0.4
growth on oleic acid YNB Glucose -0.1 -0.5 -0.3 N.D. +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.3 -0.0 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 -0.1 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.6 -0.2 N.D. -0.1
auxotrophy Dropout Complete +0.2 +0.2 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.5 -0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.4 -0.0 N.D. -0.1
auxotrophy YNB Glucose +0.2 +0.7 -0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.4 -0.1 N.D. +0.7
growth on ypd YPD -0.0 +0.1 +0.3 N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.3 -0.1 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.3 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.8 -0.0 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine +0.0 +1.0 +0.1 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.9 +0.4 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.4 +0.4 +0.6 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.9 +0.3 N.D. +0.1
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