Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13003 and 13004 are separated by 167 nucleotides
13004 and 13005 are separated by 440 nucleotides
13005 and 13006 are separated by 93 nucleotides
13006 and 13007 are separated by 130 nucleotides
mRNA_4635: 13003 - Hypothetical Protein, at 659,514 to 660,743
13003
mRNA_4636: 13004 - BLAST fungal specific transcription protein, putative [Rhiz..., at 660,911 to 661,323
13004
mRNA_4637: 13005 - Hypothetical Protein, at 661,764 to 663,098
13005
mRNA_4638: 13006 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839,SUPERFAMILY--SSF52266, at 663,192 to 664,874
13006
mRNA_4639: 13007 - KOG3469 Cytochrome c oxidase, subunit VIa/COX13, at 665,005 to 666,466
13007
Group
Condition
mRNA
_4635
mRNA
_4636
mRNA
_4637
mRNA
_4638
mRNA
_4639
13003
13004
13005
13006
13007
growth on ricinoleic acid
YNB Glucose
+0.0
-0.4
+0.0
-0.4
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.0
-0.6
+0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
+0.2
-0.4
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
-0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.1
-0.0
-0.2
+0.1
growth on ypd
YPD
+0.4
-0.5
-0.4
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.1
+0.5
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.1
+0.0
+0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
-0.2
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
+0.2
+0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.3
-0.1
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.3
+0.4
-0.2
+0.4
auxotrophy
YNB Glucose
-0.2
+0.2
+0.7
-0.1
+0.3
auxotrophy
Dropout Complete
-0.1
+0.2
+0.7
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.7
-0.1
+0.3
+0.2
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.3
+0.4
+0.1
+0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
+0.8
+0.0
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.1
+0.3
+0.3
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.3
+0.8
+0.0
+0.1
growth on oleic acid
YNB Oleic Acid
+0.4
+0.5
+0.2
+0.3
-0.1
growth on oleic acid
YNB Glucose
+0.5
+0.5
+0.1
+0.2
+0.4
remove
mRNA_4635
plot
remove
mRNA_4636
plot
remove
mRNA_4637
remove
mRNA_4638
plot
remove
mRNA_4639
plot