Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13004 and 13005 are separated by 440 nucleotides13005 and 13006 are separated by 93 nucleotides13006 and 13007 are separated by 130 nucleotides13007 and 13008 are separated by 266 nucleotides mRNA_4636: 13004 - BLAST fungal specific transcription protein, putative [Rhiz..., at 660,911 to 661,323 13004 mRNA_4637: 13005 - Hypothetical Protein, at 661,764 to 663,098 13005 mRNA_4638: 13006 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839,SUPERFAMILY--SSF52266, at 663,192 to 664,874 13006 mRNA_4639: 13007 - KOG3469 Cytochrome c oxidase, subunit VIa/COX13, at 665,005 to 666,466 13007 mRNA_4640: 13008 - KOG1399 Flavin-containing monooxygenase, at 666,733 to 668,799 13008
Group Condition mRNA_4636 mRNA_4637 mRNA_4638 mRNA_4639 mRNA_4640
13004 13005 13006 13007 13008
growth on ricinoleic acid YNB Glucose -0.4 +0.0 -0.4 -0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.6 +0.3 -0.1 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.1 -0.3 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 -0.4 -0.5 -0.2
growth on ypd YPD -0.5 -0.4 -0.1 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.2 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.4 +0.1 +0.6 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.5 +0.0 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 +0.3 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.1 +0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 +0.3 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 +0.1 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.3 +0.2 +0.0 +0.0
auxotrophy YNB Glucose +0.2 +0.7 -0.1 +0.3 -0.4
auxotrophy Dropout Complete +0.2 +0.7 +0.1 +0.0 -0.3
growth on oleic acid YNB Oleic Acid +0.5 +0.2 +0.3 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.4 -0.2 +0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 +0.3 +0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.8 +0.0 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.8 +0.0 +0.3 -0.1
growth on oleic acid YNB Glucose +0.5 +0.1 +0.2 +0.4 +0.0
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