Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13007 and 13008 are separated by 266 nucleotides13008 and 13009 are separated by 393 nucleotides13009 and 13010 are separated by 1059 nucleotides13010 and 13011 are separated by 86 nucleotides mRNA_4639: 13007 - KOG3469 Cytochrome c oxidase, subunit VIa/COX13, at 665,005 to 666,466 13007 mRNA_4640: 13008 - KOG1399 Flavin-containing monooxygenase, at 666,733 to 668,799 13008 mRNA_4641: 13009 - KOG1161 Protein involved in vacuolar polyphosphate accumulation, contains SPX domain, at 669,193 to 672,697 13009 mRNA_4642: 13010 - Hypothetical Protein, at 673,757 to 675,763 13010 mRNA_4643: 13011 - Hypothetical Protein, at 675,850 to 678,539 13011
Group Condition mRNA_4639 mRNA_4640 mRNA_4641 mRNA_4642 mRNA_4643
13007 13008 13009 13010 13011
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 -1.3 -0.6 +0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.6 -1.5 -0.2 +0.0
auxotrophy YNB Glucose +0.3 -0.4 -1.6 -0.4 -0.2
auxotrophy Dropout Complete +0.0 -0.3 -1.5 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.6 -1.4 -0.7 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.7 -2.3 +1.4 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.4 -0.7 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 -1.0 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 +0.4 -1.1 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -1.1 +0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 -1.3 +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 -0.9 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.7 +0.4 -0.1
growth on oleic acid YNB Glucose +0.4 +0.0 -1.5 +0.8 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 -1.0 +0.5 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.0 -0.0 -0.7 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 -0.5 +0.6 -0.1
growth on ypd YPD +0.4 -0.1 +0.7 -0.8 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 -0.5 +0.6 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.7 +0.7 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.1 -0.5 -0.2 +0.5
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