Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13012 and 13013 are separated by 422 nucleotides13013 and 13014 are separated by 63 nucleotides13014 and 13015 are separated by 415 nucleotides13015 and 13016 are separated by 96 nucleotides mRNA_4644: 13012 - Hypothetical Protein, at 679,484 to 680,110 13012 mRNA_4645: 13013 - Hypothetical Protein, at 680,533 to 681,409 13013 mRNA_4646: 13014 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 681,473 to 684,221 13014 mRNA_4647: 13015 - K03032 PSMD1, RPN2 26S proteasome regulatory subunit N2, at 684,637 to 688,290 13015 mRNA_4648: 13016 - HMMPfam-Mediator complex subunit Med5-PF08689, at 688,387 to 691,863 13016
Group Condition mRNA_4644 mRNA_4645 mRNA_4646 mRNA_4647 mRNA_4648
13012 13013 13014 13015 13016
ypd buoyancy 40 hrs No Buoyancy Separation -3.1 +0.2 -0.5 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -1.2 -0.1 -0.2 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.8 -0.1 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -1.0 -0.2 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -1.5 -0.0 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.6 +0.0 -0.2 N.D. -0.0
growth on oleic acid YNB Glucose +0.0 -0.6 +0.1 N.D. -0.2
auxotrophy YNB Glucose +0.0 -0.8 +0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.2 N.D. -0.1
growth on ypd YPD +0.2 -0.6 -0.0 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.3 -0.2 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.1 +0.1 N.D. -0.0
auxotrophy Dropout Complete +0.0 -0.4 +0.3 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 +0.1 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.2 +0.1 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.0 +0.2 N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 -0.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 -0.3 +0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 -0.1 -0.4 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.7 +0.1 -0.4 N.D. +0.2
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