Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13013 and 13014 are separated by 63 nucleotides13014 and 13015 are separated by 415 nucleotides13015 and 13016 are separated by 96 nucleotides13016 and 13017 are separated by 208 nucleotides mRNA_4645: 13013 - Hypothetical Protein, at 680,533 to 681,409 13013 mRNA_4646: 13014 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 681,473 to 684,221 13014 mRNA_4647: 13015 - K03032 PSMD1, RPN2 26S proteasome regulatory subunit N2, at 684,637 to 688,290 13015 mRNA_4648: 13016 - HMMPfam-Mediator complex subunit Med5-PF08689, at 688,387 to 691,863 13016 mRNA_4649: 13017 - K03934 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, at 692,072 to 694,733 13017
Group Condition mRNA_4645 mRNA_4646 mRNA_4647 mRNA_4648 mRNA_4649
13013 13014 13015 13016 13017
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 -0.0 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 -0.2 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.8 -0.1 N.D. -0.2 N.D.
growth on oleic acid YNB Glucose -0.6 +0.1 N.D. -0.2 N.D.
growth on ypd YPD -0.6 -0.0 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 N.D. -0.1 N.D.
auxotrophy YNB Glucose -0.8 +0.1 N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 N.D. -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.5 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.0 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.1 N.D. -0.0 N.D.
auxotrophy Dropout Complete -0.4 +0.3 N.D. +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 N.D. -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 N.D. -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.2 N.D. +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.2 N.D. +0.4 N.D.
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