Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13015 and 13016 are separated by 96 nucleotides13016 and 13017 are separated by 208 nucleotides13017 and 13018 are separated by 273 nucleotides13018 and 13019 are separated by 439 nucleotides mRNA_4647: 13015 - K03032 PSMD1, RPN2 26S proteasome regulatory subunit N2, at 684,637 to 688,290 13015 mRNA_4648: 13016 - HMMPfam-Mediator complex subunit Med5-PF08689, at 688,387 to 691,863 13016 mRNA_4649: 13017 - K03934 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, at 692,072 to 694,733 13017 mRNA_4650: 13018 - K02919 RP-L36, MRPL36, rpmJ large subunit ribosomal protein L36, at 695,007 to 695,565 13018 mRNA_4651: 13019 - Hypothetical Protein, at 696,005 to 696,627 13019
Group Condition mRNA_4647 mRNA_4648 mRNA_4649 mRNA_4650 mRNA_4651
13015 13016 13017 13018 13019
growth on ricinoleic acid YNB Glucose N.D. -0.2 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 N.D. -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 N.D. -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 N.D. -0.7 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 N.D. -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 N.D. +0.2 N.D.
growth on ypd YPD N.D. -0.0 N.D. +0.1 N.D.
growth on oleic acid YNB Glucose N.D. -0.2 N.D. +0.5 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.0 N.D. +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 N.D. -0.1 N.D.
auxotrophy YNB Glucose N.D. +0.1 N.D. +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 N.D. +0.4 N.D.
auxotrophy Dropout Complete N.D. +0.0 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 N.D. +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 N.D. +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 N.D. +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 N.D. +0.7 N.D.
remove
mRNA_4647
plot		 remove
mRNA_4648
plot		 remove
mRNA_4649		 remove
mRNA_4650
plot		 remove
mRNA_4651
plot