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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13023 and 13024 are separated by 257 nucleotides
13024 and 13025 are separated by 345 nucleotides
13025 and 13026 are separated by 444 nucleotides
13026 and 13027 are separated by 752 nucleotides
mRNA_4655: 13023 - K03124 TFIIB, GTF2B, SUA7, tfb transcription initiation factor TFIIB, at 700,768 to 702,328
13023
mRNA_4656: 13024 - Hypothetical Protein, at 702,586 to 704,357
13024
mRNA_4657: 13025 - Hypothetical Protein, at 704,703 to 705,380
13025
mRNA_4658: 13026 - Hypothetical Protein, at 705,825 to 708,792
13026
mRNA_4659: 13027 - KOG1134 Uncharacterized conserved protein, at 709,545 to 713,167
13027
Group
Condition
mRNA
_4655
mRNA
_4656
mRNA
_4657
mRNA
_4658
mRNA
_4659
13023
13024
13025
13026
13027
auxotrophy
Dropout Complete
N.D.
+0.2
-0.8
-0.1
-2.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.0
-1.5
-0.1
-0.9
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-1.1
+0.1
-1.5
auxotrophy
YNB Glucose
N.D.
+0.2
-0.7
+0.0
-1.9
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.1
+0.0
-2.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
-0.9
-0.0
-1.3
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.5
-0.1
-1.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.1
+0.0
-1.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
-0.4
-0.1
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
-0.3
+0.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.4
-0.6
+0.2
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
-0.4
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
+0.1
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
-0.4
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
+0.1
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.4
+0.2
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.2
-0.0
+0.5
growth on ypd
YPD
N.D.
-0.0
+0.3
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.5
+0.8
+0.2
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
+0.3
+0.2
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.3
+0.5
+0.2
-0.1
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