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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13032 and 13033 are separated by 194 nucleotides
13033 and 13034 are separated by 145 nucleotides
13034 and 13035 are separated by 480 nucleotides
13035 and 13036 are separated by 731 nucleotides
mRNA_4664: 13032 - Hypothetical Protein, at 726,545 to 727,733
13032
mRNA_4665: 13033 - K02332 POLG1, MIP1 DNA polymerase gamma 1, at 727,928 to 732,665
13033
mRNA_4666: 13034 - KOG3429 Predicted peptidyl-tRNA hydrolase, at 732,811 to 733,473
13034
mRNA_4667: 13035 - HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729, at 733,954 to 735,722
13035
mRNA_4668: 13036 - Hypothetical Protein, at 736,454 to 737,863
13036
Group
Condition
mRNA
_4664
mRNA
_4665
mRNA
_4666
mRNA
_4667
mRNA
_4668
13032
13033
13034
13035
13036
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
N.D.
N.D.
-0.6
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
N.D.
N.D.
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
N.D.
N.D.
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
N.D.
-0.4
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
N.D.
N.D.
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
N.D.
N.D.
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
N.D.
-0.2
-0.0
growth on ypd
YPD
-0.2
N.D.
N.D.
+0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
N.D.
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
N.D.
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
N.D.
N.D.
-0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
N.D.
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
N.D.
-0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
N.D.
-0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
N.D.
N.D.
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
N.D.
N.D.
+0.2
+0.0
growth on oleic acid
YNB Glucose
+0.1
N.D.
N.D.
+0.2
+0.0
auxotrophy
YNB Glucose
-0.1
N.D.
N.D.
+0.3
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
N.D.
+0.3
+0.2
auxotrophy
Dropout Complete
+0.2
N.D.
N.D.
+0.4
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
N.D.
+0.4
+0.4
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