Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13038 and 13039 are separated by 200 nucleotides
13039 and 13040 are separated by 472 nucleotides
13040 and 13041 are separated by 379 nucleotides
13041 and 13042 are separated by 525 nucleotides
mRNA_4670: 13038 - Hypothetical Protein, at 738,816 to 739,415
13038
mRNA_4671: 13039 - Hypothetical Protein, at 739,616 to 741,558
13039
mRNA_4672: 13040 - K11979 UBR7 E3 ubiquitin-protein ligase UBR7, at 742,031 to 743,506
13040
mRNA_4673: 13041 - K01069 E3.1.2.6, gloB hydroxyacylglutathione hydrolase, at 743,886 to 745,346
13041
mRNA_4674: 13042 - K08150 SLC2A13, ITR MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13, at 745,872 to 747,839
13042
Group
Condition
mRNA
_4670
mRNA
_4671
mRNA
_4672
mRNA
_4673
mRNA
_4674
13038
13039
13040
13041
13042
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-1.1
+0.5
-1.9
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.1
+0.2
+0.2
-0.2
growth on ypd
YPD
+0.7
-0.2
-0.1
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+1.2
-0.1
+1.4
-2.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.1
+0.2
+0.2
-0.2
growth on oleic acid
YNB Oleic Acid
+0.3
-0.4
-0.1
+1.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.4
+0.1
+0.6
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.5
+0.8
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.7
+0.1
+0.9
-1.3
+0.5
growth on ricinoleic acid
YNB Glucose
+0.5
+0.1
+0.4
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.9
+0.1
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.8
+0.2
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+2.2
+0.2
+0.2
-0.4
-0.7
growth on oleic acid
YNB Glucose
+0.5
-0.0
+0.5
+1.0
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.8
+0.3
+0.9
-0.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+1.4
+0.4
+0.4
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+1.3
-0.0
+1.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+1.1
+0.4
+0.8
+0.2
auxotrophy
YNB Glucose
+2.0
+0.6
+0.0
+0.5
-0.3
auxotrophy
Dropout Complete
+2.8
-0.1
+0.3
+0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
+2.0
+0.4
+0.4
+0.9
-0.3
remove
mRNA_4670
plot
remove
mRNA_4671
plot
remove
mRNA_4672
remove
mRNA_4673
plot
remove
mRNA_4674
plot