Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13048 and 13049 are separated by 1254 nucleotides13049 and 13050 are separated by 760 nucleotides13050 and 13051 are separated by 381 nucleotides13051 and 13052 are separated by 507 nucleotides mRNA_4680: 13048 - K01067 E3.1.2.1, ACH1 acetyl-CoA hydrolase, at 756,608 to 758,345 13048 mRNA_4681: 13049 - K01539 ATP1A sodium/potassium-transporting ATPase subunit alpha, at 759,600 to 763,345 13049 mRNA_4682: 13050 - HMMPfam-Tim44-like domain-PF04280,SMART--SM00978,SUPERFAMILY--SSF54427, at 764,106 to 764,879 13050 mRNA_4683: 13051 - Hypothetical Protein, at 765,261 to 766,282 13051 mRNA_4684: 13052 - K12603 CNOT6, CCR4 CCR4-NOT transcription complex subunit 6, at 766,790 to 769,374 13052
Group Condition mRNA_4680 mRNA_4681 mRNA_4682 mRNA_4683 mRNA_4684
13048 13049 13050 13051 13052
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.4 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 N.D. N.D. N.D.
growth on oleic acid YNB Glucose -0.2 -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.0 -0.3 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.3 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.1 -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.4 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.3 N.D. N.D. N.D.
growth on ypd YPD +0.5 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.5 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.5 N.D. N.D. N.D.
remove
mRNA_4680
plot		 remove
mRNA_4681
plot		 remove
mRNA_4682		 remove
mRNA_4683
plot		 remove
mRNA_4684
plot