Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13051 and 13052 are separated by 507 nucleotides13052 and 13053 are separated by 305 nucleotides13053 and 13054 are separated by 103 nucleotides13054 and 13055 are separated by 415 nucleotides mRNA_4683: 13051 - Hypothetical Protein, at 765,261 to 766,282 13051 mRNA_4684: 13052 - K12603 CNOT6, CCR4 CCR4-NOT transcription complex subunit 6, at 766,790 to 769,374 13052 mRNA_4685: 13053 - K18192 ATP10 mitochondrial ATPase complex subunit ATP10, at 769,680 to 770,905 13053 mRNA_4686: 13054 - HMMPfam-COMPASS (Complex proteins associated with Set1p) component shg1-PF05205, at 771,009 to 771,893 13054 mRNA_4687: 13055 - BLAST Autophagy-related protein 11 [Termitomyces sp. J132], at 772,309 to 775,320 13055
Group Condition mRNA_4683 mRNA_4684 mRNA_4685 mRNA_4686 mRNA_4687
13051 13052 13053 13054 13055
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -3.0 -1.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. -1.3 -1.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. -0.1 -2.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -1.2 -0.8
auxotrophy YNB Glucose N.D. N.D. N.D. -1.4 +0.5
growth on ypd YPD N.D. N.D. N.D. -0.5 -0.3
auxotrophy Dropout Complete N.D. N.D. N.D. -1.0 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. -0.9 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -0.0 -0.6
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. -0.6 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.4 +0.5
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. +0.1 +0.0
growth on oleic acid YNB Glucose N.D. N.D. N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. +0.7 -0.5
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. -0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. +0.8 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.2 +0.7
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. +0.7 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +1.7 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. +0.8 +0.8
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