Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13053 and 13054 are separated by 103 nucleotides13054 and 13055 are separated by 415 nucleotides13055 and 13056 are separated by 2702 nucleotides13056 and 13057 are separated by 1374 nucleotides mRNA_4685: 13053 - K18192 ATP10 mitochondrial ATPase complex subunit ATP10, at 769,680 to 770,905 13053 mRNA_4686: 13054 - HMMPfam-COMPASS (Complex proteins associated with Set1p) component shg1-PF05205, at 771,009 to 771,893 13054 mRNA_4687: 13055 - BLAST Autophagy-related protein 11 [Termitomyces sp. J132], at 772,309 to 775,320 13055 mRNA_4688: 13056 - Hypothetical Protein, at 778,023 to 779,802 13056 mRNA_4689: 13057 - Hypothetical Protein, at 781,177 to 782,706 13057
Group Condition mRNA_4685 mRNA_4686 mRNA_4687 mRNA_4688 mRNA_4689
13053 13054 13055 13056 13057
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.2 -0.8 -0.3 -1.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -3.0 -1.2 +0.6 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.3 -1.4 -0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -2.4 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.6 -0.3 -1.0
growth on ricinoleic acid YNB Glucose N.D. -0.6 +0.1 -0.2 -0.6
auxotrophy YNB Glucose N.D. -1.4 +0.5 +0.1 -0.4
auxotrophy Dropout Complete N.D. -1.0 +0.2 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. -0.9 +0.3 -0.3 -0.3
growth on ypd YPD N.D. -0.5 -0.3 +0.3 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.0 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 +0.3 +0.2 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 +0.5 +0.1 -0.1
growth on oleic acid YNB Glucose N.D. -0.1 +0.2 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.3 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.7 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.7 -0.5 +0.4 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.8 -0.1 +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.7 +0.2 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.8 +0.8 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +1.7 -0.1 +0.0 +0.3
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