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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13061 and 13062 are separated by 2021 nucleotides
13062 and 13063 are separated by 328 nucleotides
13063 and 13064 are separated by 1911 nucleotides
13064 and 13065 are separated by 323 nucleotides
mRNA_4693: 13061 - Hypothetical Protein, at 790,475 to 790,930
13061
mRNA_4694: 13062 - K11252 H2B histone H2B, at 792,952 to 793,587
13062
mRNA_4695: 13063 - K11251 H2A histone H2A, at 793,916 to 794,516
13063
mRNA_4696: 13064 - KOG1756 Histone 2A, at 796,428 to 796,805
13064
mRNA_4697: 13065 - K05291 PIGS phosphatidylinositol glycan, class S, at 797,129 to 800,158
13065
Group
Condition
mRNA
_4693
mRNA
_4694
mRNA
_4695
mRNA
_4696
mRNA
_4697
13061
13062
13063
13064
13065
facs on lipid accumulation
Sorted No BODIPY Gate
-1.4
N.D.
-0.3
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
N.D.
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
-0.3
N.D.
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
N.D.
+0.0
N.D.
+0.1
growth on ypd
YPD
-0.6
N.D.
+0.3
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
N.D.
-0.1
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.5
N.D.
+0.4
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.2
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
+0.2
N.D.
-0.1
auxotrophy
Dropout Complete
+0.0
N.D.
-0.0
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.1
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
+0.1
N.D.
-0.2
growth on oleic acid
YNB Glucose
+0.3
N.D.
+0.2
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
+0.2
N.D.
+0.2
auxotrophy
YNB Glucose
+0.8
N.D.
-0.3
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
+0.3
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
+0.8
N.D.
+0.0
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
+0.6
N.D.
+0.4
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+2.0
N.D.
-0.3
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+2.0
N.D.
+0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+2.9
N.D.
-0.1
N.D.
+0.2
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