Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13067 and 13068 are separated by 285 nucleotides13068 and 13069 are separated by 479 nucleotides13069 and 13070 are separated by 197 nucleotides13070 and 13071 are separated by 213 nucleotides mRNA_4699: 13067 - K09140 TSR3 pre-rRNA-processing protein TSR3, at 801,271 to 802,584 13067 mRNA_4700: 13068 - BLAST putative mannoprotein [Rhizoctonia solani 123E], at 802,870 to 804,709 13068 mRNA_4701: 13069 - HMMPfam-Asp/Glu/Hydantoin racemase-PF01177, at 805,189 to 806,290 13069 mRNA_4702: 13070 - K00870 E2.7.1.37 protein kinase, at 806,488 to 808,596 13070 mRNA_4703: 13071 - Hypothetical Protein, at 808,810 to 809,148 13071
Group Condition mRNA_4699 mRNA_4700 mRNA_4701 mRNA_4702 mRNA_4703
13067 13068 13069 13070 13071
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -1.0 -0.7 +0.2 -1.1
growth on ricinoleic acid YNB Glucose -0.9 -0.4 +0.1 -0.0 -1.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.5 +0.0 -0.3 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 +0.1 +0.1 -0.0 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.6 -0.5 +0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.3 -0.2 +0.1 -0.4
growth on oleic acid YNB Glucose -0.5 -0.8 +0.4 +0.3 +0.2
auxotrophy YNB Glucose -0.0 -0.3 +0.0 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 -0.1 -0.5 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.1 +0.1 -0.0 +0.7
auxotrophy Dropout Complete +0.1 -0.2 +0.2 +0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.2 -0.1 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 -0.2 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 +0.1 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.2 +0.1 +0.4 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.4 +0.2 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +0.7 -0.4 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 +0.2 +0.4 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.0 +0.1 +0.4 +0.1
growth on ypd YPD +0.6 -0.5 -0.4 +0.1 +1.2
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.2 +0.6 +0.5 -0.0
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