Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13069 and 13070 are separated by 197 nucleotides13070 and 13071 are separated by 213 nucleotides13071 and 13072 are separated by 154 nucleotides13072 and 13073 are separated by 402 nucleotides mRNA_4701: 13069 - HMMPfam-Asp/Glu/Hydantoin racemase-PF01177, at 805,189 to 806,290 13069 mRNA_4702: 13070 - K00870 E2.7.1.37 protein kinase, at 806,488 to 808,596 13070 mRNA_4703: 13071 - Hypothetical Protein, at 808,810 to 809,148 13071 mRNA_4704: 13072 - Hypothetical Protein, at 809,303 to 810,124 13072 mRNA_4705: 13073 - K06065 NCOR2, SMRT nuclear receptor co-repressor 2, at 810,527 to 816,039 13073
Group Condition mRNA_4701 mRNA_4702 mRNA_4703 mRNA_4704 mRNA_4705
13069 13070 13071 13072 13073
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +0.2 -1.1 N.D. -1.3
growth on ricinoleic acid YNB Glucose +0.1 -0.0 -1.5 N.D. -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.4 -0.5 N.D. -1.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.3 -1.0 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -0.2 N.D. -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 -0.7 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.4 N.D. +0.0
auxotrophy Dropout Complete +0.2 +0.4 -0.4 N.D. -0.4
auxotrophy YNB Glucose +0.0 +0.3 -0.2 N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.4 +0.3 N.D. -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 +0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.0 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 +0.7 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5 +0.3 N.D. +0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.4 +0.1 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.4 +0.4 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.5 -0.0 N.D. -0.7
growth on oleic acid YNB Glucose +0.4 +0.3 +0.2 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 +0.4 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.4 +0.3 N.D. -0.4
growth on ypd YPD -0.4 +0.1 +1.2 N.D. +0.1
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