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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13072 and 13073 are separated by 402 nucleotides
13073 and 13074 are separated by 343 nucleotides
13074 and 13075 are separated by 355 nucleotides
13075 and 13076 are separated by 247 nucleotides
mRNA_4704: 13072 - Hypothetical Protein, at 809,303 to 810,124
13072
mRNA_4705: 13073 - K06065 NCOR2, SMRT nuclear receptor co-repressor 2, at 810,527 to 816,039
13073
mRNA_4706: 13074 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 816,383 to 818,450
13074
mRNA_4707: 13075 - KOG4431 Uncharacterized protein, induced by hypoxia , at 818,806 to 819,404
13075
mRNA_4708: 13076 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 819,652 to 821,476
13076
Group
Condition
mRNA
_4704
mRNA
_4705
mRNA
_4706
mRNA
_4707
mRNA
_4708
13072
13073
13074
13075
13076
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.6
N.D.
-0.1
-4.7
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.0
N.D.
-0.1
-3.5
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.7
N.D.
-0.2
-3.7
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
N.D.
-3.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-1.3
N.D.
-0.9
-0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
N.D.
-1.3
-0.8
growth on oleic acid
YNB Oleic Acid
N.D.
-0.8
N.D.
-0.2
-0.7
growth on ricinoleic acid
YNB Glucose
N.D.
-1.0
N.D.
-0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.4
N.D.
-1.0
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-1.3
N.D.
+0.6
-0.6
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.4
N.D.
-0.5
-0.3
auxotrophy
YNB Glucose
N.D.
-0.2
N.D.
-0.6
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
N.D.
+0.3
-0.6
auxotrophy
Dropout Complete
N.D.
-0.4
N.D.
+0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
N.D.
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
N.D.
-0.6
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
N.D.
+0.4
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
N.D.
+0.2
-0.9
growth on oleic acid
YNB Glucose
N.D.
-0.4
N.D.
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
+0.5
-0.0
growth on ypd
YPD
N.D.
+0.1
N.D.
+1.3
-0.4
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