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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13073 and 13074 are separated by 343 nucleotides
13074 and 13075 are separated by 355 nucleotides
13075 and 13076 are separated by 247 nucleotides
13076 and 13077 are separated by 340 nucleotides
mRNA_4705: 13073 - K06065 NCOR2, SMRT nuclear receptor co-repressor 2, at 810,527 to 816,039
13073
mRNA_4706: 13074 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 816,383 to 818,450
13074
mRNA_4707: 13075 - KOG4431 Uncharacterized protein, induced by hypoxia , at 818,806 to 819,404
13075
mRNA_4708: 13076 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 819,652 to 821,476
13076
mRNA_4709: 13077 - Hypothetical Protein, at 821,817 to 823,479
13077
Group
Condition
mRNA
_4705
mRNA
_4706
mRNA
_4707
mRNA
_4708
mRNA
_4709
13073
13074
13075
13076
13077
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
N.D.
-0.1
-4.7
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
N.D.
-0.2
-3.7
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
N.D.
-0.1
-3.5
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
-3.1
-0.2
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.3
N.D.
-0.9
-0.7
-0.9
growth on oleic acid
YNB Oleic Acid
-0.8
N.D.
-0.2
-0.7
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.3
N.D.
+0.6
-0.6
-1.0
growth on ricinoleic acid
YNB Glucose
-1.0
N.D.
-0.4
-0.1
-0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.4
N.D.
-0.5
-0.3
-0.8
auxotrophy
Dropout Complete
-0.4
N.D.
+0.1
-0.4
-1.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
-1.3
-0.8
-0.1
growth on oleic acid
YNB Glucose
-0.4
N.D.
+0.4
-0.2
-1.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
N.D.
-1.0
+0.0
+0.1
auxotrophy
YNB Glucose
-0.2
N.D.
-0.6
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
N.D.
+0.3
-0.6
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
N.D.
+0.1
-0.3
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
N.D.
+0.4
-0.9
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
-0.6
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
N.D.
+0.2
-0.9
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.5
-0.0
+0.1
growth on ypd
YPD
+0.1
N.D.
+1.3
-0.4
-0.4
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