Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13077 and 13078 are separated by 704 nucleotides13078 and 13079 are separated by 328 nucleotides13079 and 13080 are separated by 232 nucleotides13080 and 13081 are separated by 334 nucleotides mRNA_4709: 13077 - Hypothetical Protein, at 821,817 to 823,479 13077 mRNA_4710: 13078 - BLAST putative mannoprotein [Rhizoctonia solani 123E], at 824,184 to 826,218 13078 mRNA_4711: 13079 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 826,547 to 830,720 13079 mRNA_4712: 13080 - HMMPfam-N-terminal C2 in EEIG1 and EHBP1 proteins-PF10358, at 830,953 to 834,055 13080 mRNA_4713: 13081 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 834,390 to 838,234 13081
Group Condition mRNA_4709 mRNA_4710 mRNA_4711 mRNA_4712 mRNA_4713
13077 13078 13079 13080 13081
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 -0.2 -0.1 -0.4
auxotrophy Dropout Complete -1.3 -0.2 +0.2 +0.5 +0.1
growth on oleic acid YNB Oleic Acid -0.8 +0.4 -0.1 -0.2 -0.1
growth on ypd YPD -0.4 -0.6 -0.0 +0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 +0.3 +0.3 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 +0.0 -0.2 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.0 -0.0 +0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 -0.0 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.5 +0.3 -0.5 -0.5
growth on ricinoleic acid YNB Glucose -0.8 -0.2 +0.1 +0.7 -0.2
growth on oleic acid YNB Glucose -1.1 +0.3 -0.0 +0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.3 +0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.8 +0.2 +0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.7 -0.2 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 +0.2 +0.3 +0.7 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.4 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.6 -0.1 +0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.2 +0.2 +0.7 +0.1
auxotrophy YNB Glucose -0.4 +0.3 +0.1 +0.7 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.6 +0.4 +0.2 -0.2
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