Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13081 and 13082 are separated by 124 nucleotides13082 and 13083 are separated by 115 nucleotides13083 and 13084 are separated by 222 nucleotides13084 and 13085 are separated by 1417 nucleotides mRNA_4713: 13081 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 834,390 to 838,234 13081 mRNA_4714: 13082 - K01183 E3.2.1.14 chitinase, at 838,359 to 840,435 13082 mRNA_4715: 13083 - KOG1730 Thioredoxin-like protein, at 840,551 to 841,550 13083 mRNA_4716: 13084 - SUPERFAMILY--SSF55753, at 841,773 to 842,668 13084 mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844,086 to 846,101 13085
Group Condition mRNA_4713 mRNA_4714 mRNA_4715 mRNA_4716 mRNA_4717
13081 13082 13083 13084 13085
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -1.7 -0.5 -3.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.0 -0.0 -0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 -0.1 -0.4 -0.4
auxotrophy Dropout Complete +0.1 +0.2 -0.9 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1 +0.1 -0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.2 +0.0 +0.3 -0.1
auxotrophy YNB Glucose +0.0 -0.1 -0.4 +0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.3 +0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.6 +0.4 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.2 +0.1 -0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.7 -0.0 +0.8 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 +0.3 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 +0.3 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.4 +0.2 +0.0 +0.1
growth on ypd YPD -0.2 +0.3 +0.2 -0.3 +0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.3 +0.2 +0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.1 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 +0.1 +0.1 +0.2
growth on oleic acid YNB Glucose -0.0 -0.2 +0.6 +0.4 +0.1
growth on oleic acid YNB Oleic Acid -0.1 +0.2 +0.2 +0.3 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.3 +0.1 +0.6 +0.3
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