Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13083 and 13084 are separated by 222 nucleotides
13084 and 13085 are separated by 1417 nucleotides
13085 and 13086 are separated by 841 nucleotides
13086 and 13087 are separated by 283 nucleotides
mRNA_4715: 13083 - KOG1730 Thioredoxin-like protein, at 840,551 to 841,550
13083
mRNA_4716: 13084 - SUPERFAMILY--SSF55753, at 841,773 to 842,668
13084
mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844,086 to 846,101
13085
mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846,943 to 849,026
13086
mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849,310 to 850,936
13087
Group
Condition
mRNA
_4715
mRNA
_4716
mRNA
_4717
mRNA
_4718
mRNA
_4719
13083
13084
13085
13086
13087
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-3.6
+0.1
-0.2
-0.0
auxotrophy
Dropout Complete
-0.9
+0.1
-0.3
-0.3
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.5
-0.2
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.4
-0.2
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.3
-0.4
-0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.4
-0.0
+0.1
+0.0
auxotrophy
YNB Glucose
-0.4
+0.4
-0.4
+0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
-0.0
+0.1
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.3
-0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Glucose
+0.2
+0.4
-0.5
-0.1
+0.1
growth on ypd
YPD
+0.2
-0.3
+0.0
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.2
+0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.2
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.2
-0.0
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.0
-0.2
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.0
+0.1
+0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.1
-0.1
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.8
+0.0
+0.3
-0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.3
+0.5
+0.0
+0.2
growth on oleic acid
YNB Glucose
+0.6
+0.4
+0.1
-0.2
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.6
+0.3
+0.4
+0.1
remove
mRNA_4715
plot
remove
mRNA_4716
plot
remove
mRNA_4717
remove
mRNA_4718
plot
remove
mRNA_4719
plot