Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13084 and 13085 are separated by 1417 nucleotides13085 and 13086 are separated by 841 nucleotides13086 and 13087 are separated by 283 nucleotides13087 and 13088 are separated by 283 nucleotides mRNA_4716: 13084 - SUPERFAMILY--SSF55753, at 841,773 to 842,668 13084 mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844,086 to 846,101 13085 mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846,943 to 849,026 13086 mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849,310 to 850,936 13087 mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851,220 to 854,422 13088
Group Condition mRNA_4716 mRNA_4717 mRNA_4718 mRNA_4719 mRNA_4720
13084 13085 13086 13087 13088
ypd buoyancy 40 hrs No Buoyancy Separation -3.6 +0.1 -0.2 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.2 -0.0 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4 -0.2 +0.4 +0.1
growth on ricinoleic acid YNB Glucose +0.4 -0.5 -0.1 +0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.0 +0.1 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 -0.0 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.1 +0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 +0.2 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.4 -0.2 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 +0.1 +0.1 -0.1
auxotrophy Dropout Complete +0.1 -0.3 -0.3 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.1 -0.1 -0.2
auxotrophy YNB Glucose +0.4 -0.4 +0.0 +0.2 -0.2
growth on ypd YPD -0.3 +0.0 +0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +0.0 +0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.3 +0.5 +0.0 +0.2 -0.2
growth on oleic acid YNB Glucose +0.4 +0.1 -0.2 +0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.8 +0.0 +0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.3 +0.4 +0.1 -0.2
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