Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13085 and 13086 are separated by 841 nucleotides13086 and 13087 are separated by 283 nucleotides13087 and 13088 are separated by 283 nucleotides13088 and 13089 are separated by 242 nucleotides mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844,086 to 846,101 13085 mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846,943 to 849,026 13086 mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849,310 to 850,936 13087 mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851,220 to 854,422 13088 mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854,665 to 858,103 13089
Group Condition mRNA_4717 mRNA_4718 mRNA_4719 mRNA_4720 mRNA_4721
13085 13086 13087 13088 13089
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 +0.1 +0.1 -3.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 -0.2 -0.3 -2.8
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.4 +0.1 -0.2 -3.6
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 -0.1 -0.1 -3.0
growth on ricinoleic acid YNB Glucose -0.5 -0.1 +0.1 -0.3 -1.9
auxotrophy Dropout Complete -0.3 -0.3 +0.5 -0.1 -2.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 +0.2 -0.1 -1.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 +0.1 +0.0 -1.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 -0.0 -0.0 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.2 +0.4 +0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.2 -0.0 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 +0.0 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.1 -0.2 -0.3
growth on ypd YPD +0.0 +0.1 +0.1 +0.2 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 +0.0 -0.1 +0.1
auxotrophy YNB Glucose -0.4 +0.0 +0.2 -0.2 +0.7
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.2 +0.1 -0.2 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.1 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.1 -0.1 +0.7
growth on oleic acid YNB Glucose +0.1 -0.2 +0.4 +0.1 +0.3
growth on oleic acid YNB Oleic Acid +0.5 +0.0 +0.2 -0.2 +1.8
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