Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13086 and 13087 are separated by 283 nucleotides13087 and 13088 are separated by 283 nucleotides13088 and 13089 are separated by 242 nucleotides13089 and 13090 are separated by 345 nucleotides mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846,943 to 849,026 13086 mRNA_4719: 13087 - K18693 DPP1 diacylglycerol diphosphate phosphatase / phosphatidate phosphatase, at 849,310 to 850,936 13087 mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851,220 to 854,422 13088 mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854,665 to 858,103 13089 mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858,449 to 860,854 13090
Group Condition mRNA_4718 mRNA_4719 mRNA_4720 mRNA_4721 mRNA_4722
13086 13087 13088 13089 13090
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 -0.3 -2.8 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.1 -0.2 -3.6 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 +0.1 -3.6 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 -0.1 -3.0 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.3 -1.9 +0.0
auxotrophy Dropout Complete -0.3 +0.5 -0.1 -2.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 -0.1 -1.7 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +0.0 -1.7 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 -0.1 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 -0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 -0.0 -0.5 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.0 -0.3 -0.1 -0.1
growth on ypd YPD +0.1 +0.1 +0.2 -0.8 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.4 +0.1 -0.6 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 -0.1 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 -0.2 +0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.1 +0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.1 +0.7 -0.2
auxotrophy YNB Glucose +0.0 +0.2 -0.2 +0.7 -0.0
growth on oleic acid YNB Glucose -0.2 +0.4 +0.1 +0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.0 +0.2 -0.2 +1.8 +0.0
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