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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13088 and 13089 are separated by 242 nucleotides
13089 and 13090 are separated by 345 nucleotides
13090 and 13091 are separated by 244 nucleotides
13091 and 13092 are separated by 220 nucleotides
mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851,220 to 854,422
13088
mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854,665 to 858,103
13089
mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858,449 to 860,854
13090
mRNA_4723: 13091 - Hypothetical Protein, at 861,099 to 862,312
13091
mRNA_4724: 13092 - Hypothetical Protein, at 862,533 to 863,753
13092
Group
Condition
mRNA
_4720
mRNA
_4721
mRNA
_4722
mRNA
_4723
mRNA
_4724
13088
13089
13090
13091
13092
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-2.8
+0.0
-1.8
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-3.6
+0.0
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-3.6
+0.1
-0.7
+0.8
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.1
-1.8
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.5
-0.2
-1.4
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-1.7
+0.1
-0.8
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
-1.9
+0.0
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-3.0
-0.1
+0.3
+0.5
auxotrophy
Dropout Complete
-0.1
-2.1
+0.1
+0.8
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.3
-0.1
-0.6
-0.9
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.5
-0.3
-0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-1.7
+0.0
+0.8
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.2
+0.0
-0.5
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.6
-0.2
-0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.7
-0.2
-0.4
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.6
+0.1
+0.8
-0.6
growth on ypd
YPD
+0.2
-0.8
+0.1
+1.0
+0.2
auxotrophy
YNB Glucose
-0.2
+0.7
-0.0
+0.7
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
+0.2
+0.6
+0.1
growth on oleic acid
YNB Oleic Acid
-0.2
+1.8
+0.0
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.3
+0.1
+1.0
+0.1
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