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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13089 and 13090 are separated by 345 nucleotides
13090 and 13091 are separated by 244 nucleotides
13091 and 13092 are separated by 220 nucleotides
13092 and 13093 are separated by 1601 nucleotides
mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854,665 to 858,103
13089
mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858,449 to 860,854
13090
mRNA_4723: 13091 - Hypothetical Protein, at 861,099 to 862,312
13091
mRNA_4724: 13092 - Hypothetical Protein, at 862,533 to 863,753
13092
mRNA_4725: 13093 - Hypothetical Protein, at 865,355 to 866,563
13093
Group
Condition
mRNA
_4721
mRNA
_4722
mRNA
_4723
mRNA
_4724
mRNA
_4725
13089
13090
13091
13092
13093
growth on ricinoleic acid
YNB Ricinoleic Acid
-3.6
+0.0
-0.2
-0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.8
+0.0
-1.8
+0.1
+1.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.2
-1.4
-0.9
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.1
-1.8
-0.9
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-3.6
+0.1
-0.7
+0.8
+0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.7
+0.1
-0.8
-0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-3.0
-0.1
+0.3
+0.5
+0.3
growth on ricinoleic acid
YNB Glucose
-1.9
+0.0
-0.1
-0.1
+0.2
auxotrophy
Dropout Complete
-2.1
+0.1
+0.8
-0.7
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.6
-0.9
+0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.3
-0.3
-0.4
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.0
-0.5
-0.4
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-1.7
+0.0
+0.8
-0.2
+0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.7
-0.2
-0.4
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.6
-0.2
-0.4
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
+0.1
+0.8
-0.6
+0.4
growth on ypd
YPD
-0.8
+0.1
+1.0
+0.2
+0.1
growth on oleic acid
YNB Glucose
+0.3
+0.1
+1.0
+0.1
-0.4
auxotrophy
YNB Glucose
+0.7
-0.0
+0.7
-0.4
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.2
+0.6
+0.1
+0.3
growth on oleic acid
YNB Oleic Acid
+1.8
+0.0
-0.1
+0.1
+0.1
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