Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13089 and 13090 are separated by 345 nucleotides13090 and 13091 are separated by 244 nucleotides13091 and 13092 are separated by 220 nucleotides13092 and 13093 are separated by 1601 nucleotides mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854,665 to 858,103 13089 mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858,449 to 860,854 13090 mRNA_4723: 13091 - Hypothetical Protein, at 861,099 to 862,312 13091 mRNA_4724: 13092 - Hypothetical Protein, at 862,533 to 863,753 13092 mRNA_4725: 13093 - Hypothetical Protein, at 865,355 to 866,563 13093
Group Condition mRNA_4721 mRNA_4722 mRNA_4723 mRNA_4724 mRNA_4725
13089 13090 13091 13092 13093
growth on ricinoleic acid YNB Ricinoleic Acid -3.6 +0.0 -0.2 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -2.8 +0.0 -1.8 +0.1 +1.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.2 -1.4 -0.9 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 -1.8 -0.9 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -3.6 +0.1 -0.7 +0.8 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.7 +0.1 -0.8 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -3.0 -0.1 +0.3 +0.5 +0.3
growth on ricinoleic acid YNB Glucose -1.9 +0.0 -0.1 -0.1 +0.2
auxotrophy Dropout Complete -2.1 +0.1 +0.8 -0.7 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.6 -0.9 +0.7
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.3 -0.3 -0.4 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.0 -0.5 -0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine -1.7 +0.0 +0.8 -0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.7 -0.2 -0.4 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.6 -0.2 -0.4 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 +0.8 -0.6 +0.4
growth on ypd YPD -0.8 +0.1 +1.0 +0.2 +0.1
growth on oleic acid YNB Glucose +0.3 +0.1 +1.0 +0.1 -0.4
auxotrophy YNB Glucose +0.7 -0.0 +0.7 -0.4 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 +0.6 +0.1 +0.3
growth on oleic acid YNB Oleic Acid +1.8 +0.0 -0.1 +0.1 +0.1
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