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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13091 and 13092 are separated by 220 nucleotides
13092 and 13093 are separated by 1601 nucleotides
13093 and 13094 are separated by 392 nucleotides
13094 and 13095 are separated by 279 nucleotides
mRNA_4723: 13091 - Hypothetical Protein, at 861,099 to 862,312
13091
mRNA_4724: 13092 - Hypothetical Protein, at 862,533 to 863,753
13092
mRNA_4725: 13093 - Hypothetical Protein, at 865,355 to 866,563
13093
mRNA_4726: 13094 - KOG3214 Uncharacterized Zn ribbon-containing protein, at 866,956 to 867,873
13094
mRNA_4727: 13095 - Hypothetical Protein, at 868,153 to 868,831
13095
Group
Condition
mRNA
_4723
mRNA
_4724
mRNA
_4725
mRNA
_4726
mRNA
_4727
13091
13092
13093
13094
13095
ypd buoyancy
40 hrs No Buoyancy Separation
-1.8
-0.9
+0.2
-0.5
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.4
-0.9
+0.3
-0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
-0.3
-0.0
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
+0.1
+1.7
+0.1
-1.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.3
-0.1
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
-0.2
+0.2
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
+0.1
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.4
-0.0
+0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.4
+0.4
-0.4
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
+0.2
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.9
+0.7
+0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
+0.8
+0.8
-0.4
-0.9
auxotrophy
YNB Glucose
+0.7
-0.4
+0.3
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
+0.1
+0.3
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.5
+0.3
-0.2
-0.7
auxotrophy
Dropout Complete
+0.8
-0.7
+0.6
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.8
-0.6
+0.4
-0.1
-0.0
growth on oleic acid
YNB Glucose
+1.0
+0.1
-0.4
+0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
+0.1
+0.3
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.8
-0.2
+0.6
-0.1
-0.2
growth on ypd
YPD
+1.0
+0.2
+0.1
+0.4
-0.1
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