Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13092 and 13093 are separated by 1601 nucleotides
13093 and 13094 are separated by 392 nucleotides
13094 and 13095 are separated by 279 nucleotides
13095 and 13096 are separated by 70 nucleotides
mRNA_4724: 13092 - Hypothetical Protein, at 862,533 to 863,753
13092
mRNA_4725: 13093 - Hypothetical Protein, at 865,355 to 866,563
13093
mRNA_4726: 13094 - KOG3214 Uncharacterized Zn ribbon-containing protein, at 866,956 to 867,873
13094
mRNA_4727: 13095 - Hypothetical Protein, at 868,153 to 868,831
13095
mRNA_4728: 13096 - HMMPfam-CUE domain-PF02845,HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13532,ProSiteProfiles-CUE domain profile.-PS51140,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 868,902 to 870,638
13096
Group
Condition
mRNA
_4724
mRNA
_4725
mRNA
_4726
mRNA
_4727
mRNA
_4728
13092
13093
13094
13095
13096
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.3
-0.0
-1.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
+0.3
-0.3
+0.1
-0.2
growth on oleic acid
YNB Glucose
+0.1
-0.4
+0.3
-0.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
+0.2
-0.5
+0.2
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.4
-0.4
+0.2
-0.2
auxotrophy
YNB Glucose
-0.4
+0.3
-0.2
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.0
+0.2
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.6
+0.4
-0.1
-0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.3
-0.2
-0.7
-0.3
auxotrophy
Dropout Complete
-0.7
+0.6
-0.1
-0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
-0.2
+0.0
+0.4
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.3
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
+0.7
+0.5
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.2
+0.1
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
-0.2
+0.0
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.8
+0.8
-0.4
-0.9
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
-0.0
-0.3
+0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.6
-0.1
-0.2
+0.2
growth on ypd
YPD
+0.2
+0.1
+0.4
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
+0.1
-0.3
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+1.7
+0.1
-1.1
+0.2
remove
mRNA_4724
plot
remove
mRNA_4725
plot
remove
mRNA_4726
remove
mRNA_4727
plot
remove
mRNA_4728
plot