Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13093 and 13094 are separated by 392 nucleotides13094 and 13095 are separated by 279 nucleotides13095 and 13096 are separated by 70 nucleotides13096 and 13097 are separated by 200 nucleotides mRNA_4725: 13093 - Hypothetical Protein, at 865,355 to 866,563 13093 mRNA_4726: 13094 - KOG3214 Uncharacterized Zn ribbon-containing protein, at 866,956 to 867,873 13094 mRNA_4727: 13095 - Hypothetical Protein, at 868,153 to 868,831 13095 mRNA_4728: 13096 - HMMPfam-CUE domain-PF02845,HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13532,ProSiteProfiles-CUE domain profile.-PS51140,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 868,902 to 870,638 13096 mRNA_4729: 13097 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 870,839 to 873,938 13097
Group Condition mRNA_4725 mRNA_4726 mRNA_4727 mRNA_4728 mRNA_4729
13093 13094 13095 13096 13097
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.0 -1.0 +0.4 -0.2
growth on oleic acid YNB Glucose -0.4 +0.3 -0.2 -0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.2 -0.7 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 +0.2 -0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.3 -0.3 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.3 +0.1 -0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.4 +0.2 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.8 -0.4 -0.9 -0.1 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.5 +0.2 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 -0.1 +0.1 +0.1
auxotrophy YNB Glucose +0.3 -0.2 -0.2 +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 +0.0 +0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 +0.0 +0.4 +0.2
growth on ypd YPD +0.1 +0.4 -0.1 -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.0 -0.3 +0.6 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.1 -0.0 -0.1 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 +0.5 -0.1 -0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.1 -0.3 +0.5 +0.3
auxotrophy Dropout Complete +0.6 -0.1 -0.2 +0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.1 -0.2 +0.2 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +1.7 +0.1 -1.1 +0.2 +0.2
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