Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13097 and 13098 are separated by 324 nucleotides13098 and 13099 are separated by 199 nucleotides13099 and 13100 are separated by 1078 nucleotides13100 and 13101 are separated by 557 nucleotides mRNA_4729: 13097 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 870,839 to 873,938 13097 mRNA_4730: 13098 - K06062 PCAF, KAT2, GCN5 histone acetyltransferase, at 874,263 to 876,540 13098 mRNA_4731: 13099 - K08770 UBC ubiquitin C, at 876,740 to 878,353 13099 mRNA_4732: 13100 - HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338, at 879,432 to 880,805 13100 mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881,363 to 882,284 13101
Group Condition mRNA_4729 mRNA_4730 mRNA_4731 mRNA_4732 mRNA_4733
13097 13098 13099 13100 13101
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.8 -0.1 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.6 -0.2 -0.1 -0.0 -1.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.2 -0.1 -0.2 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.4 -0.1 -0.3 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.3 -0.1 -0.2 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -1.1 -0.0 +0.5 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.5 -0.1 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +1.0 -0.2 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.0 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.3 -0.0 +0.1 +0.2
auxotrophy Dropout Complete +0.3 +0.8 -0.0 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.4 -0.2 -0.4 +0.2
auxotrophy YNB Glucose +0.3 +0.6 -0.1 -0.4 +0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.1 +0.3 -0.3 +0.5
growth on oleic acid YNB Glucose +0.1 +0.7 -0.0 +0.1 -0.0
growth on ypd YPD +0.2 -0.2 +0.1 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +1.2 +0.1 -0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.0 +1.1 +0.0 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +1.1 +0.4 -0.3 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.6 +1.1 -0.2 -0.4 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.9 +0.3 -0.3 +0.7
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