Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13100 and 13101 are separated by 557 nucleotides13101 and 13102 are separated by 900 nucleotides13102 and 13103 are separated by 484 nucleotides13103 and 13104 are separated by 103 nucleotides mRNA_4732: 13100 - HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338, at 879,432 to 880,805 13100 mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881,363 to 882,284 13101 mRNA_4734: 13102 - Hypothetical Protein, at 883,185 to 884,845 13102 mRNA_4735: 13103 - K03654 recQ ATP-dependent DNA helicase RecQ, at 885,330 to 888,560 13103 mRNA_4736: 13104 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 888,664 to 889,665 13104
Group Condition mRNA_4732 mRNA_4733 mRNA_4734 mRNA_4735 mRNA_4736
13100 13101 13102 13103 13104
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -1.2 +0.6 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.8 +0.2 -0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.8 +0.4 +0.0 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.4 -0.4 -0.5 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.5 +0.5 -0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.0 -0.1 +0.1
auxotrophy Dropout Complete -0.3 -0.3 +0.3 +0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 +0.1 -0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.4 -0.0 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.2 +0.3 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 +0.4 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 +0.4 +0.1 +0.3
growth on oleic acid YNB Glucose +0.1 -0.0 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 -0.0 -0.1 +0.2
auxotrophy YNB Glucose -0.4 +0.0 +0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 +0.3 +0.0 +0.6
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.4 +0.3 +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.4 +0.6 +0.3 +0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.5 +0.6 +0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.7 +0.7 +0.3 +0.0
growth on ypd YPD +0.3 +0.5 +0.9 +0.2 +0.8
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