Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13104 and 13105 are separated by 99 nucleotides13105 and 13106 are separated by 68 nucleotides13106 and 13107 are separated by 459 nucleotides13107 and 13108 are separated by 646 nucleotides mRNA_4736: 13104 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 888,664 to 889,665 13104 mRNA_4737: 13105 - K15272 SLC35A1_2_3 solute carrier family 35 (UDP-sugar transporter), member A1/2/3, at 889,765 to 891,262 13105 mRNA_4738: 13106 - K01738 cysK cysteine synthase A, at 891,331 to 893,508 13106 mRNA_4739: 13107 - K06883 K06883 uncharacterized protein, at 893,968 to 895,440 13107 mRNA_4740: 13108 - Hypothetical Protein, at 896,087 to 896,524 13108
Group Condition mRNA_4736 mRNA_4737 mRNA_4738 mRNA_4739 mRNA_4740
13104 13105 13106 13107 13108
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.6 -0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.2 -0.6 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.2 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.0 -0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.2 -0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 -0.2 N.D. +0.0
auxotrophy YNB Glucose +0.2 +0.3 -0.5 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 -0.0 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 -0.3 N.D. +0.1
auxotrophy Dropout Complete +0.2 +0.2 -0.1 N.D. -0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -0.4 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.3 -0.5 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 -0.0 N.D. -0.3
growth on oleic acid YNB Glucose +0.1 +0.2 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.1 +0.0 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.4 -0.4 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.4 -0.2 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 -0.1 N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.0 +0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.3 -0.1 N.D. -0.1
growth on ypd YPD +0.8 -0.0 -0.3 N.D. +0.5
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