Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13105 and 13106 are separated by 68 nucleotides13106 and 13107 are separated by 459 nucleotides13107 and 13108 are separated by 646 nucleotides13108 and 13109 are separated by 259 nucleotides mRNA_4737: 13105 - K15272 SLC35A1_2_3 solute carrier family 35 (UDP-sugar transporter), member A1/2/3, at 889,765 to 891,262 13105 mRNA_4738: 13106 - K01738 cysK cysteine synthase A, at 891,331 to 893,508 13106 mRNA_4739: 13107 - K06883 K06883 uncharacterized protein, at 893,968 to 895,440 13107 mRNA_4740: 13108 - Hypothetical Protein, at 896,087 to 896,524 13108 mRNA_4741: 13109 - KOG2208 Vigilin, at 896,784 to 901,112 13109
Group Condition mRNA_4737 mRNA_4738 mRNA_4739 mRNA_4740 mRNA_4741
13105 13106 13107 13108 13109
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 N.D. -0.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.6 N.D. -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.5 N.D. -0.2 -0.3
growth on ricinoleic acid YNB Glucose +0.1 -0.4 N.D. +0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 N.D. -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.4 N.D. +0.2 -0.8
auxotrophy Dropout Complete +0.2 -0.1 N.D. -0.2 -0.3
auxotrophy YNB Glucose +0.3 -0.5 N.D. -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.2 N.D. +0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.3 N.D. +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.0 N.D. -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 N.D. -0.1 -0.0
growth on oleic acid YNB Glucose +0.2 -0.1 N.D. +0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.0 +0.1 N.D. +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.2 N.D. +0.1 -0.0
growth on ypd YPD -0.0 -0.3 N.D. +0.5 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 N.D. -0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 N.D. +0.2 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.5 N.D. +0.1 +1.1
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