Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13108 and 13109 are separated by 259 nucleotides
13109 and 13110 are separated by 278 nucleotides
13110 and 13111 are separated by 1290 nucleotides
13111 and 13112 are separated by 1103 nucleotides
mRNA_4740: 13108 - Hypothetical Protein, at 896,087 to 896,524
13108
mRNA_4741: 13109 - KOG2208 Vigilin, at 896,784 to 901,112
13109
mRNA_4742: 13110 - SUPERFAMILY--SSF52047, at 901,391 to 902,457
13110
mRNA_4743: 13111 - BLAST Nucleolar protein 4 [Choanephora cucurbitarum], at 903,748 to 904,899
13111
mRNA_4744: 13112 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 906,003 to 908,213
13112
Group
Condition
mRNA
_4740
mRNA
_4741
mRNA
_4742
mRNA
_4743
mRNA
_4744
13108
13109
13110
13111
13112
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.8
+0.2
-0.9
-0.5
growth on ricinoleic acid
YNB Glucose
+0.1
-0.5
-0.3
-0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.0
-0.5
-0.2
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.4
+0.3
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
-0.4
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.1
-0.5
+0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.3
+0.1
-0.2
-0.5
auxotrophy
YNB Glucose
-0.2
-0.0
-0.4
+0.6
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.6
+0.1
+0.4
-0.1
auxotrophy
Dropout Complete
-0.2
-0.3
-0.5
+0.8
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.0
-0.2
+0.2
-0.3
growth on oleic acid
YNB Glucose
+0.1
-0.0
+0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.1
-0.3
+0.5
-0.1
growth on ypd
YPD
+0.5
+0.3
-0.5
-0.3
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
+0.2
+0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.5
-0.0
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.4
-0.0
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.3
-0.1
+0.2
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.3
+0.3
+0.9
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.5
+0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+1.1
-0.4
+0.2
+0.1
remove
mRNA_4740
plot
remove
mRNA_4741
plot
remove
mRNA_4742
remove
mRNA_4743
plot
remove
mRNA_4744
plot