Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13109 and 13110 are separated by 278 nucleotides
13110 and 13111 are separated by 1290 nucleotides
13111 and 13112 are separated by 1103 nucleotides
13112 and 13113 are separated by 525 nucleotides
mRNA_4741: 13109 - KOG2208 Vigilin, at 896,784 to 901,112
13109
mRNA_4742: 13110 - SUPERFAMILY--SSF52047, at 901,391 to 902,457
13110
mRNA_4743: 13111 - BLAST Nucleolar protein 4 [Choanephora cucurbitarum], at 903,748 to 904,899
13111
mRNA_4744: 13112 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 906,003 to 908,213
13112
mRNA_4745: 13113 - K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4, at 908,739 to 911,438
13113
Group
Condition
mRNA
_4741
mRNA
_4742
mRNA
_4743
mRNA
_4744
mRNA
_4745
13109
13110
13111
13112
13113
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+0.2
-0.9
-0.5
+0.1
growth on ricinoleic acid
YNB Glucose
-0.5
-0.3
-0.2
-0.6
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.5
-0.2
-0.6
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.1
+0.4
-0.1
-0.8
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.3
-0.3
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.5
+0.3
-0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.1
-0.2
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.4
-0.1
-0.0
+0.1
auxotrophy
YNB Glucose
-0.0
-0.4
+0.6
-0.4
-0.0
growth on ypd
YPD
+0.3
-0.5
-0.3
+0.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
-0.0
-0.2
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.2
+0.2
-0.3
+0.1
auxotrophy
Dropout Complete
-0.3
-0.5
+0.8
-0.1
+0.1
growth on oleic acid
YNB Glucose
-0.0
+0.1
-0.1
-0.0
+0.3
growth on oleic acid
YNB Oleic Acid
-0.1
+0.2
-0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
+0.5
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.0
+0.0
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
+0.2
+0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+1.1
-0.4
+0.2
+0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.5
+0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.3
+0.9
-0.0
+0.2
remove
mRNA_4741
plot
remove
mRNA_4742
plot
remove
mRNA_4743
remove
mRNA_4744
plot
remove
mRNA_4745
plot