Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13111 and 13112 are separated by 1103 nucleotides13112 and 13113 are separated by 525 nucleotides13113 and 13114 are separated by 290 nucleotides13114 and 13115 are separated by 316 nucleotides mRNA_4743: 13111 - BLAST Nucleolar protein 4 [Choanephora cucurbitarum], at 903,748 to 904,899 13111 mRNA_4744: 13112 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 906,003 to 908,213 13112 mRNA_4745: 13113 - K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4, at 908,739 to 911,438 13113 mRNA_4746: 13114 - Hypothetical Protein, at 911,729 to 913,359 13114 mRNA_4747: 13115 - SUPERFAMILY--SSF52047, at 913,676 to 915,300 13115
Group Condition mRNA_4743 mRNA_4744 mRNA_4745 mRNA_4746 mRNA_4747
13111 13112 13113 13114 13115
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.5 +0.1 +0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.1 -0.8 +0.3 -1.0
growth on ricinoleic acid YNB Glucose -0.2 -0.6 -0.0 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.3 -0.2 -0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -0.2 -0.2 +0.1
auxotrophy YNB Glucose +0.6 -0.4 -0.0 -0.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.3 -0.1 +0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.6 +0.2 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 +0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 +0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.4 +0.1 -0.0 -0.1
growth on oleic acid YNB Glucose -0.1 -0.0 +0.3 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 -0.0 +0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 -0.3 +0.1 +0.3
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.2 +0.2 +0.1
growth on ypd YPD -0.3 +0.0 +0.2 +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 -0.1 +0.4 -0.1
auxotrophy Dropout Complete +0.8 -0.1 +0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 +0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.1 -0.1 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.9 -0.0 +0.2 +0.2 +0.0
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