Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13112 and 13113 are separated by 525 nucleotides
13113 and 13114 are separated by 290 nucleotides
13114 and 13115 are separated by 316 nucleotides
13115 and 13116 are separated by 298 nucleotides
mRNA_4744: 13112 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 906,003 to 908,213
13112
mRNA_4745: 13113 - K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4, at 908,739 to 911,438
13113
mRNA_4746: 13114 - Hypothetical Protein, at 911,729 to 913,359
13114
mRNA_4747: 13115 - SUPERFAMILY--SSF52047, at 913,676 to 915,300
13115
mRNA_4748: 13116 - Hypothetical Protein, at 915,599 to 917,193
13116
Group
Condition
mRNA
_4744
mRNA
_4745
mRNA
_4746
mRNA
_4747
mRNA
_4748
13112
13113
13114
13115
13116
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.8
+0.3
-1.0
+0.2
auxotrophy
YNB Glucose
-0.4
-0.0
-0.2
-0.6
-0.1
growth on ricinoleic acid
YNB Glucose
-0.6
-0.0
-0.3
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.2
-0.2
+0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.2
-0.3
-0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
+0.1
+0.3
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.1
-0.0
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+0.2
+0.1
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
+0.3
-0.0
-0.1
auxotrophy
Dropout Complete
-0.1
+0.1
-0.1
-0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.1
-0.1
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
+0.4
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.2
+0.2
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
+0.5
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.1
+0.5
+0.1
-0.5
growth on oleic acid
YNB Glucose
-0.0
+0.3
+0.0
+0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
+0.4
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.3
+0.1
+0.3
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.2
+0.2
+0.1
+0.1
growth on ypd
YPD
+0.0
+0.2
+0.2
+0.3
+0.2
remove
mRNA_4744
plot
remove
mRNA_4745
plot
remove
mRNA_4746
remove
mRNA_4747
plot
remove
mRNA_4748
plot