Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13118 and 13119 are separated by 288 nucleotides13119 and 13120 are separated by 250 nucleotides13120 and 13121 are separated by 285 nucleotides13121 and 13122 are separated by 544 nucleotides mRNA_4750: 13118 - Hypothetical Protein, at 919,411 to 921,092 13118 mRNA_4751: 13119 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 921,381 to 922,742 13119 mRNA_4752: 13120 - KOG1263 Multicopper oxidases, at 922,993 to 927,297 13120 mRNA_4753: 13121 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 927,583 to 931,061 13121 mRNA_4754: 13122 - ProSiteProfiles-F-box domain profile.-PS50181, at 931,606 to 933,249 13122
Group Condition mRNA_4750 mRNA_4751 mRNA_4752 mRNA_4753 mRNA_4754
13118 13119 13120 13121 13122
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.2 -0.0 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.6 -0.1 -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.5 -0.6 +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.1 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.1 -0.1 -0.0 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.0 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 +0.1 -0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.5 +0.1 -0.1 +0.2
auxotrophy Dropout Complete +0.1 -0.2 +0.1 -0.0 -0.0
growth on oleic acid YNB Oleic Acid +0.2 -0.3 -0.2 +0.1 +0.3
auxotrophy YNB Glucose +0.0 -0.2 +0.1 +0.1 -0.0
growth on oleic acid YNB Glucose +0.0 -0.1 +0.1 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.0 +0.1 +0.2 -0.0
growth on ypd YPD -0.1 +0.1 +0.4 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 +0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.0 +0.0 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 +0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.3 +0.0 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.6 -0.3 +0.3 -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.0 +0.2 +0.0 +0.2
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