Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13119 and 13120 are separated by 250 nucleotides13120 and 13121 are separated by 285 nucleotides13121 and 13122 are separated by 544 nucleotides13122 and 13123 are separated by 1233 nucleotides mRNA_4751: 13119 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 921,381 to 922,742 13119 mRNA_4752: 13120 - KOG1263 Multicopper oxidases, at 922,993 to 927,297 13120 mRNA_4753: 13121 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 927,583 to 931,061 13121 mRNA_4754: 13122 - ProSiteProfiles-F-box domain profile.-PS50181, at 931,606 to 933,249 13122 mRNA_4755: 13123 - Hypothetical Protein, at 934,483 to 935,126 13123
Group Condition mRNA_4751 mRNA_4752 mRNA_4753 mRNA_4754 mRNA_4755
13119 13120 13121 13122 13123
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 -0.0 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.1 -0.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.1 -0.1 +0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.3 -0.2 +0.1 +0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.1 +0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.6 +0.0 +0.2 +0.8
auxotrophy YNB Glucose -0.2 +0.1 +0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 -0.0 +0.2 +0.1
auxotrophy Dropout Complete -0.2 +0.1 -0.0 -0.0 +0.2
growth on oleic acid YNB Glucose -0.1 +0.1 -0.0 +0.3 -0.0
growth on ricinoleic acid YNB Glucose -0.3 +0.3 -0.0 +0.1 +0.1
growth on ypd YPD +0.1 +0.4 -0.0 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.0 -0.1 +0.0 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 -0.0 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 +0.1 +0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 +0.1 +0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 +0.0 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.0 +0.2 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.2 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.1 +0.2 -0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.0 +0.1 +0.1 +0.7
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