Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13120 and 13121 are separated by 285 nucleotides13121 and 13122 are separated by 544 nucleotides13122 and 13123 are separated by 1233 nucleotides13123 and 13124 are separated by 305 nucleotides mRNA_4752: 13120 - KOG1263 Multicopper oxidases, at 922,993 to 927,297 13120 mRNA_4753: 13121 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 927,583 to 931,061 13121 mRNA_4754: 13122 - ProSiteProfiles-F-box domain profile.-PS50181, at 931,606 to 933,249 13122 mRNA_4755: 13123 - Hypothetical Protein, at 934,483 to 935,126 13123 mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935,432 to 936,982 13124
Group Condition mRNA_4752 mRNA_4753 mRNA_4754 mRNA_4755 mRNA_4756
13120 13121 13122 13123 13124
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.0 -0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.0 +0.2 +0.8 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 +0.1 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 +0.1 -0.3 +0.2
growth on ypd YPD +0.4 -0.0 -0.1 -0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.1 +0.3 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 +0.2 -0.2 +0.2
auxotrophy YNB Glucose +0.1 +0.1 -0.0 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 +0.3 +0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 +0.0 +0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 +0.2 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.1 +0.1 +0.7 -0.4
growth on oleic acid YNB Glucose +0.1 -0.0 +0.3 -0.0 +0.3
auxotrophy Dropout Complete +0.1 -0.0 -0.0 +0.2 +0.3
growth on ricinoleic acid YNB Glucose +0.3 -0.0 +0.1 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 -0.0 +0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 +0.2 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 +0.2 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 +0.1 +0.6 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 +0.2 +0.4 +0.6
remove
mRNA_4752
plot
remove
mRNA_4753
plot
remove
mRNA_4754
remove
mRNA_4755
plot
remove
mRNA_4756
plot