Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13121 and 13122 are separated by 544 nucleotides13122 and 13123 are separated by 1233 nucleotides13123 and 13124 are separated by 305 nucleotides13124 and 13125 are separated by 416 nucleotides mRNA_4753: 13121 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 927,583 to 931,061 13121 mRNA_4754: 13122 - ProSiteProfiles-F-box domain profile.-PS50181, at 931,606 to 933,249 13122 mRNA_4755: 13123 - Hypothetical Protein, at 934,483 to 935,126 13123 mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935,432 to 936,982 13124 mRNA_4757: 13125 - Hypothetical Protein, at 937,399 to 937,793 13125
Group Condition mRNA_4753 mRNA_4754 mRNA_4755 mRNA_4756 mRNA_4757
13121 13122 13123 13124 13125
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.3 -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.2 +0.8 -0.6 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 -0.3 +0.2 -0.1
growth on ypd YPD -0.0 -0.1 -0.2 +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.0 +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.0 +0.1 +0.1 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.7 -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 -0.2 +0.2 +0.1
auxotrophy YNB Glucose +0.1 -0.0 -0.1 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.2 +0.1 +0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.3 -0.2 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.0 +0.5 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 +0.3 +0.2 -0.1
auxotrophy Dropout Complete -0.0 -0.0 +0.2 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.6 +0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.1 -0.3 +0.2 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 +0.5 -0.0 -0.2
growth on oleic acid YNB Glucose -0.0 +0.3 -0.0 +0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.0 +0.5 -0.2 +0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 +0.2 +0.0 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 +0.4 +0.6 +0.1
remove
mRNA_4753
plot
remove
mRNA_4754
plot
remove
mRNA_4755
remove
mRNA_4756
plot
remove
mRNA_4757
plot