Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13132 and 13133 are separated by 279 nucleotides13133 and 13134 are separated by 239 nucleotides13134 and 13135 are separated by 322 nucleotides13135 and 13136 are separated by 286 nucleotides mRNA_4764: 13132 - K12842 SR140 U2-associated protein SR140, at 954,648 to 957,720 13132 mRNA_4765: 13133 - SUPERFAMILY--SSF52058, at 958,000 to 961,527 13133 mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961,767 to 963,160 13134 mRNA_4767: 13135 - KOG1263 Multicopper oxidases, at 963,483 to 966,203 13135 mRNA_4768: 13136 - Hypothetical Protein, at 966,490 to 969,299 13136
Group Condition mRNA_4764 mRNA_4765 mRNA_4766 mRNA_4767 mRNA_4768
13132 13133 13134 13135 13136
facs on lipid accumulation Sorted High BODIPY Gate -2.4 +0.1 -0.4 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -2.4 +0.1 -0.2 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 -0.0 -0.0 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 -0.1 +0.1 +0.1 +0.1
auxotrophy YNB Glucose -1.5 -0.2 +0.3 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -1.4 -0.2 +0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 -0.3 +0.3 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -1.5 -0.1 +0.3 -0.1 -0.0
growth on oleic acid YNB Glucose -1.2 -0.1 +0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.0 -0.1 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 +0.2 +0.7 -0.4 -0.0
growth on ricinoleic acid YNB Glucose -0.4 -0.0 +0.1 -0.1 -0.2
auxotrophy Dropout Complete -0.2 -0.2 +0.2 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 -0.0 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.4 -0.1 +0.2 +0.1 +0.1
growth on ypd YPD +0.5 -0.1 -0.2 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 +0.7 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.1 +0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.9 +0.1 +0.1 +0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.9 +0.0 +0.6 -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy +1.5 +0.0 +0.5 +0.0 +0.1
remove
mRNA_4764
plot
remove
mRNA_4765
plot
remove
mRNA_4766
remove
mRNA_4767
plot
remove
mRNA_4768
plot