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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13132 and 13133 are separated by 279 nucleotides
13133 and 13134 are separated by 239 nucleotides
13134 and 13135 are separated by 322 nucleotides
13135 and 13136 are separated by 286 nucleotides
mRNA_4764: 13132 - K12842 SR140 U2-associated protein SR140, at 954,648 to 957,720
13132
mRNA_4765: 13133 - SUPERFAMILY--SSF52058, at 958,000 to 961,527
13133
mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961,767 to 963,160
13134
mRNA_4767: 13135 - KOG1263 Multicopper oxidases, at 963,483 to 966,203
13135
mRNA_4768: 13136 - Hypothetical Protein, at 966,490 to 969,299
13136
Group
Condition
mRNA
_4764
mRNA
_4765
mRNA
_4766
mRNA
_4767
mRNA
_4768
13132
13133
13134
13135
13136
facs on lipid accumulation
Sorted High BODIPY Gate
-2.4
+0.1
-0.4
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-2.4
+0.1
-0.2
+0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.7
-0.0
-0.0
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.9
-0.1
+0.1
+0.1
+0.1
auxotrophy
YNB Glucose
-1.5
-0.2
+0.3
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-1.4
-0.2
+0.1
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.1
-0.3
+0.3
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-1.5
-0.1
+0.3
-0.1
-0.0
growth on oleic acid
YNB Glucose
-1.2
-0.1
+0.3
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.0
-0.1
-0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
+0.2
+0.7
-0.4
-0.0
growth on ricinoleic acid
YNB Glucose
-0.4
-0.0
+0.1
-0.1
-0.2
auxotrophy
Dropout Complete
-0.2
-0.2
+0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
-0.0
-0.2
-0.0
growth on oleic acid
YNB Oleic Acid
-0.4
-0.1
+0.2
+0.1
+0.1
growth on ypd
YPD
+0.5
-0.1
-0.2
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.1
+0.7
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
-0.1
+0.1
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.9
+0.1
+0.1
+0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.9
+0.0
+0.6
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+1.5
+0.0
+0.5
+0.0
+0.1
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