Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13135 and 13136 are separated by 286 nucleotides13136 and 13137 are separated by 325 nucleotides13137 and 13138 are separated by 374 nucleotides13138 and 13139 are separated by 921 nucleotides mRNA_4767: 13135 - KOG1263 Multicopper oxidases, at 963,483 to 966,203 13135 mRNA_4768: 13136 - Hypothetical Protein, at 966,490 to 969,299 13136 mRNA_4769: 13137 - K01866 YARS, tyrS tyrosyl-tRNA synthetase, at 969,625 to 971,504 13137 mRNA_4770: 13138 - KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference, at 971,879 to 977,050 13138 mRNA_4771: 13139 - K20062 ART4_5_7 arrestin-related trafficking adapter 4/5/7, at 977,972 to 980,923 13139
Group Condition mRNA_4767 mRNA_4768 mRNA_4769 mRNA_4770 mRNA_4771
13135 13136 13137 13138 13139
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.0 N.D. -0.4 N.D.
auxotrophy YNB Glucose -0.3 -0.1 N.D. -0.1 N.D.
auxotrophy Dropout Complete -0.1 -0.2 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.2 N.D. +0.1 N.D.
growth on ypd YPD -0.1 -0.1 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.0 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 N.D. +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.0 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose -0.1 +0.1 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 N.D. +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 N.D. +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.0 N.D. +0.1 N.D.
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